ncRNA ID | novel_gra_miR175 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:15173902-15174101 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 177 - AUGGAACUGUGGUUCUACGUCAUU - 200 |
Stem-loop(if miRNA) |
--              C  C   A  C    C C            -      C      A      C  -C           CU     CUCG  AAAAA   AUGGAACUGUGGUU UA GUC UU UUAU C UUUCUAAUAGGA GAAUGA AAAUCA AUUUUU CU  UUGAUUUUUAG  UUUUC    UG     U   |||||||||||||| || ||| || |||| | |||||||||||| |||||| |||||| |||||| ||  |||||||||||  |||||    ||     U   UACUUUGACAUUAA AU CAG AA AAUA G AAAGAUUAUCUU CUUACU UUUAGU UAAAAA GA  GAUUAAAAAUU  AAAAG    AC     C UA              A  A   A  A    A A            U      A      C      A  AA           AU     -UCA  CUAAA |
Stem-loop sequence | AUGGAACUGUGGUUCUACGUCAUUCUUAUCCCUUUCUAAUAGGAGAAUGACAAAUCAAAUUUUUCCUCUUGAUUUUUAGCUUUUUCCUCGUGAAAAAUUCAAAUCCAACUGAAAAUAUUAAAAAUUAGAAAGAAAAAAUCUGAUUUAUCAUUCUUUCUAUUAGAAAAGAAUAAAAAAGACAUAAAAUUACAGUUUCAUAU |