ncRNA ID | novel_gra_miR171 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:55232963-55233078 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGGUCGUGAUCUUUAGCGGCGU - 24 |
Stem-loop(if miRNA) |
--                                GUG  -AA               UC   GCCGCUAAAGGUCAUGAUCUUUAGCGGCGUUU   AU   AAGCGCCGCUAAAGG  A   ||||||||||||||||||||||||||||||||   ||   |||||||||||||||   CGGCGAUUUCUAGUGCUGGAAAUCGCUGCGAA   UA   UUUGCGGCGAUUUCU  U UG                                -AA  GUG               UG |
Stem-loop sequence | GCCGCUAAAGGUCAUGAUCUUUAGCGGCGUUUGUGAUAAAAGCGCCGCUAAAGGUCAUGUUCUUUAGCGGCGUUUGUGAUAAAAGCGUCGCUAAAGGUCGUGAUCUUUAGCGGCGU |