ncRNA ID | novel_gra_miR168 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr8:44767401-44767544 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAAUGUUCUGGGCUUUAGCGGCG - 24 |
Stem-loop(if miRNA) |
--    U    U    U            UUA  U            U          -            UU   CUAA GUUC GGGC UUAGCGGCGUUU   UG AAGCGCCGCUAA GUUCUGGGAU UUAGCGGCGUUU  A   |||| |||| |||| ||||||||||||   || |||||||||||| |||||||||| ||||||||||||   GAUU CGGG CUUG AAUCGCCGCGAA   AU UUUGCGGUGAUU UAGGAUCUUG AAUCGCCGCGAA  U GC    U    U    U            UUG  U            -          U            UU |
Stem-loop sequence | CUAAUGUUCUGGGCUUUAGCGGCGUUUUUAUGUAAGCGCCGCUAAUGUUCUGGGAUUUAGCGGCGUUUUUAUUUAAGCGCCGCUAAUGUUCUAGGAUUUAGUGGCGUUUUUAGUUAAGCGCCGCUAAUGUUCUGGGCUUUAGCG |