ncRNA ID | novel_gra_miR166 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:50291187-50291286 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616256 |
Length | 24 |
Mature sequence(if miRNA) | 77 - AAAGCGCUCUGACGUGGACGCGAU - 100 |
Stem-loop(if miRNA) |
-- A AC - U CGCGUCCAUGUCAGAGCGCUUU CUGACGUGG ACAAAUCGCG CU A |||||||||||||||||||||| ||||||||| |||||||||| || C GCGCAGGUGCAGUCUCGCGAAA GACUGCACC UGUUUAGCGC GG G UA C GU A U |
Stem-loop sequence | CGCGUCCAUGUCAGAGCGCUUUACUGACGUGGACACAAAUCGCGCUUACGUGGACGCGAUUUGUUGCCACGUCAGCAAAGCGCUCUGACGUGGACGCGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012622070.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA | uncharacterized LOC105793143(LOC105793143) | coding protein | psRNATarget |