ncRNA ID | novel_gra_miR165 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:45663896-45663951 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUUGAUGUGGCAAGUUAACUGCU - 24 |
Stem-loop(if miRNA) |
--AG                    CUGA     UUGAUGUGGCAAGUUAACUG    U     ||||||||||||||||||||     GAUUGCACUGUUCAAUUGAC    G UGUA                    CAGU |
Stem-loop sequence | AGUUGAUGUGGCAAGUUAACUGCUGAUGUGACCAGUUAACUUGUCACGUUAGAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012606482.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105781975 (LOC105781975), transcript variant X1, mRNA | uncharacterized LOC105781975(LOC105781975) | coding protein | psRNATarget |