ncRNA ID | novel_gra_miR161 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr5:14443455-14443530 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 53 - CUGACGUGGAUGCGAUUUCCUGGC - 76 |
Stem-loop(if miRNA) |
--         A       A                AC   CAGGAAAUC CAUCCAC UCAGUGCGAGUUGCUG  A   ||||||||| ||||||| ||||||||||||||||   GUCCUUUAG GUAGGUG AGUCACGCUCAAUGAC  U CG         C       C                GG |
Stem-loop sequence | CAGGAAAUCACAUCCACAUCAGUGCGAGUUGCUGACAUGGCAGUAACUCGCACUGACGUGGAUGCGAUUUCCUGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012622070.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA | uncharacterized LOC105793143(LOC105793143) | coding protein | psRNATarget |