ncRNA ID | novel_gra_miR160 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr4:219876-219945 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 20 |
Mature sequence(if miRNA) | 51 - UUGGCGUUCUGUCCACCUCC - 70 |
Stem-loop(if miRNA) |
--       U   U   C     CUAAUA UU   A   UUGGCGU CUG CCA CUCCA      C  GUU C   ||||||| ||| ||| |||||      |  |||   AACUGUA GAC GGU GAGGU      G  CGA C CA       U   C   C     --AAAG UU   U |
Stem-loop sequence | UUGGCGUUCUGUCCACCUCCACUAAUACUUGUUACCUAGCUUGGAAAUGGAGCUGGCCAGUAUGUCAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012611893.1 |
|
1.5 | PREDICTED: Gossypium raimondii F-box only protein 6 (LOC105785748), mRNA | F-box only protein 6(LOC105785748) | coding protein | psRNATarget | |||||||||
XM_012623676.1 |
|
2.5 | PREDICTED: Gossypium raimondii F-box only protein 6-like (LOC105794488), mRNA | F-box only protein 6-like(LOC105794488) | coding protein | psRNATarget |