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BaseInfo

ncRNA ID	novel_gra_miR155
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr4:6433505-6433563 [-]
Reference genome	Graimondii2_0
Source	SRR616255
Length	24
Mature sequence(if miRNA)	1 - GAAAGAGCGCCCUGUAAGACGCGU - 24
Stem-loop(if miRNA)	--             UA G       - UG   GUGUCUUGUAGGG  C UUUUCAG C  A   |||||||||||||  | ||||||| |   CGCAGAAUGUCCC  G GAAAGUU G  C UG             GC A       A UG
Stem-loop sequence	GUGUCUUGUAGGGUACGUUUUCAGCUGACGUGAUUGAAAGAGCGCCCUGUAAGACGCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012610389.1	ncRNA:24   UGCGCAGAAUGUCCCGCGAGAAAG   1   |||=*||*||||||||||*||||| targets:691   ACGUAUCCUACAGGGCGCGCUUUC   714 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii protein-lysine N-methyltransferase N6AMT2-like (LOC105784484), transcript variant X11, mRNA	protein-lysine N-methyltransferase N6AMT2-like(LOC105784484)	coding protein	psRNATarget
XM_012610380.1	ncRNA:24   UGCGCAGAAUGUCCCGCGAGAAAG   1   |||=*||*||||||||||*||||| targets:759   ACGUAUCCUACAGGGCGCGCUUUC   782 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii protein-lysine N-methyltransferase N6AMT2-like (LOC105784484), transcript variant X1, mRNA	protein-lysine N-methyltransferase N6AMT2-like(LOC105784484)	coding protein	psRNATarget
XM_012610381.1	ncRNA:24   UGCGCAGAAUGUCCCGCGAGAAAG   1   |||=*||*||||||||||*||||| targets:756   ACGUAUCCUACAGGGCGCGCUUUC   779 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii protein-lysine N-methyltransferase N6AMT2-like (LOC105784484), transcript variant X2, mRNA	protein-lysine N-methyltransferase N6AMT2-like(LOC105784484)	coding protein	psRNATarget