ncRNA ID | novel_gra_miR154 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr4:9012632-9012775 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 121 - CUAAUGCUCGAGGCUUUAGCGGCG - 144 |
Stem-loop(if miRNA) |
CUAAU   C    - -----U            UU              -  U  -UC   UCU    C       UU      GCU GAGG C      UUAGCGGCGUUU  GUGUAGGCGCCGCU AA GC   GGA   UUAG GGCGUUU  A      ||| |||| |      ||||||||||||  |||||||||||||| || ||   |||   |||| |||||||      CGA UUCC G      AAUCGCCGCGAA  UAUGUUUGCGGCGA UU UG   UCU   AAUC CCGCGAG  A ----G   U    A UUAUGU            UC              C  C  UUC   --U    A       UC |
Stem-loop sequence | CUAAUGCUCGAGGCUUUAGCGGCGUUUUUGUGUAGGCGCCGCUAAUGCUCGGAUCUUUAGCGGCGUUUUUAACUGAGCGCCACUAAUUCUCUUGUCUUCAGCGGCGUUUGUAUCUAAGCGCCGCUAAUGUAUUGACCUUUAGCG |