Search result

BaseInfo

ncRNA ID novel_gra_miR154
Species Gossypium raimondii
Class miRNA
Genome position Chr4:9012632-9012775 [-]
Reference genome Graimondii2_0
Source SRR616255;SRR616257
Length 24
Mature sequence(if miRNA) 121 - CUAAUGCUCGAGGCUUUAGCGGCG - 144
Stem-loop(if miRNA) CUAAU   C    - -----U            UU              -  U  -UC   UCU    C       UU
     GCU GAGG C      UUAGCGGCGUUU  GUGUAGGCGCCGCU AA GC   GGA   UUAG GGCGUUU  A
     ||| |||| |      ||||||||||||  |||||||||||||| || ||   |||   |||| |||||||
     CGA UUCC G      AAUCGCCGCGAA  UAUGUUUGCGGCGA UU UG   UCU   AAUC CCGCGAG  A
----G   U    A UUAUGU            UC              C  C  UUC   --U    A       UC
Stem-loop sequence CUAAUGCUCGAGGCUUUAGCGGCGUUUUUGUGUAGGCGCCGCUAAUGCUCGGAUCUUUAGCGGCGUUUUUAACUGAGCGCCACUAAUUCUCUUGUCUUCAGCGGCGUUUGUAUCUAAGCGCCGCUAAUGUAUUGACCUUUAGCG