ncRNA ID | novel_gra_miR152 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr4:12325039-12325110 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616256;SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 52 - UGGAGAAGCAGGGCACGUGCA - 72 |
Stem-loop(if miRNA) |
--        CA              G  UAAUUUC   UGGAGAAG  GGGCACGUGCAAAA UG       U   ||||||||  |||||||||||||| ||       C   ACCUUUUC  CUCGUGCACGUUUU GC       U CC        CC              -  CUUCUCU |
Stem-loop sequence | UGGAGAAGCAGGGCACGUGCAAAAGUGUAAUUUCUCUUCUCUUCCGUUUUGCACGUGCUCCCCUUUUCCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012583327.1 |
|
1.0 | PREDICTED: Gossypium raimondii NAC domain-containing protein 100 (LOC105764664), mRNA | NAC domain-containing protein 100(LOC105764664) | coding protein | psRNATarget | |||||||||
XM_012633473.1 |
|
1.0 | PREDICTED: Gossypium raimondii NAC domain-containing protein 100-like (LOC105802057), mRNA | NAC domain-containing protein 100-like(LOC105802057) | coding protein | psRNATarget | |||||||||
XM_012598099.1 |
|
2.0 | PREDICTED: Gossypium raimondii NAC domain-containing protein 21/22-like (LOC105775593), mRNA | NAC domain-containing protein 21/22-like(LOC105775593) | coding protein | psRNATarget |