ncRNA ID | novel_gra_miR151 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr4:18559067-18559261 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616256 |
Length | 24 |
Mature sequence(if miRNA) | 172 - AUGAAACUGUGAUUCCAUGUCAUC - 195 |
Stem-loop(if miRNA) |
--               C    C  C   AUCC    C              C      A   U   C CU         A A     -AG     UUUA   AUGAAACUGUGAUUC AUGU AU UCU    UUUU UAAUAGGAGAAUGA AAAUCA AUU UUC U  UGAUUUUUA C UUUUU   UUGGA    A   ||||||||||||||| |||| || |||    |||| |||||||||||||| |||||| ||| ||| |  ||||||||| | |||||   |||||   UACUUUGACAUUAAG UAUA UA AGA    AAAA AUUAUUUUCUUACU UUUAGU UAA AAG A  AUUAAAAAU G AAAAG   AACUU    A UA               A    A  -   ---A    A              A      C   U   A AG         C A     AAG     UUUU |
Stem-loop sequence | AUGAAACUGUGAUUCCAUGUCAUCUCUAUCCUUUUCUAAUAGGAGAAUGACAAAUCAAAUUUUUCCUCUUGAUUUUUAACAUUUUUAGUUGGAUUUAAAUUUUUUCAAGAAGAAAAAGCUAAAAAUUAGAAAGAAUAAUCUGAUUUAUCAUUCUUUUAUUAAAAAAAAGAAUAAUAUAGAAUUACAGUUUCAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012613692.1 |
|
1.5 | PREDICTED: Gossypium raimondii probable WRKY transcription factor 9 (LOC105787323), mRNA | probable WRKY transcription factor 9(LOC105787323) | coding protein | psRNATarget |