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BaseInfo

ncRNA ID	novel_gra_miR137
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr4:40601920-40602020 [+]
Reference genome	Graimondii2_0
Source	SRR616255
Length	22
Mature sequence(if miRNA)	80 - UGAUGGGCCUGCAUCGUCGUCC - 101
Stem-loop(if miRNA)	--GU   U   U   U    -   U  -    UG  G   G -A     --G U     GAC GUG CGG GCUC UCG UG GGCC  GU AUU A  UGGCU   C G     ||| ||| ||| |||| ||| || ||||  || ||| |  |||||   |     CUG UAC GUC CGGG AGU AC CCGG  CG UAA U  GCCGG   G A CCUG   C   -   -    U   U  U    GU  G   G GG     GUA U
Stem-loop sequence	GUGACUGUGUCGGUGCUCUCGUUGGGCCUGGUGAUUGAAUGGCUGCUGAUGAUGGGCCGGGUGAAUGGCUGGGCCUCAUUGAUGGGCCUGCAUCGUCGUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012625755.1	ncRNA:22   CCUGCUGCUACGUCCGGGUAGU   1   |||||||||||||*|||||||| targets:475   GGACGACGAUGCAAGCCCAUCA   496 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105796152 (LOC105796152), mRNA	uncharacterized LOC105796152(LOC105796152)	coding protein	psRNATarget
XM_012593583.1	ncRNA:22   CCUGCUGCUACGUCCGGGUAGU   1   |||||||||*|||||||||||| targets:472   GGACGACGACGCAGGCCCAUCA   493 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X2, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012593582.1	ncRNA:22   CCUGCUGCUACGUCCGGGUAGU   1   |||||||||*|||||||||||| targets:482   GGACGACGACGCAGGCCCAUCA   503 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X1, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget