ncRNA ID | novel_gra_miR134 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr4:32099153-32099233 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 61 - UUGGACCAGGCUUCAUUCCCC - 81 |
Stem-loop(if miRNA) |
--      UU            GA   CUUUUCUUGCUAA   GGAAUG  GCCUGGUUCAAG  CAC             C   ||||||  ||||||||||||  |||             C   CCUUAC  CGGACCAGGUUC  GUG             C CC      UU            UC   UCUACCUUUAAAU |
Stem-loop sequence | GGAAUGUUGCCUGGUUCAAGGACACCUUUUCUUGCUAACCCUAAAUUUCCAUCUGUGCUCUUGGACCAGGCUUCAUUCCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012607484.1 |
|
2.0 | PREDICTED: Gossypium raimondii homeobox-leucine zipper protein REVOLUTA-like (LOC105782624), mRNA | homeobox-leucine zipper protein REVOLUTA-like(LOC105782624) | coding protein | psRNATarget | |||||||||
XM_012587820.1 |
|
2.5 | PREDICTED: Gossypium raimondii homeobox-leucine zipper protein ATHB-15 (LOC105768081), mRNA | homeobox-leucine zipper protein ATHB-15(LOC105768081) | coding protein | psRNATarget |