Search result

BaseInfo

ncRNA ID novel_gra_miR131
Species Gossypium raimondii
Class miRNA
Genome position Chr4:13577002-13577143 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - CUAAAGCUCUGAGCAUUAGCGGUG - 24
Stem-loop(if miRNA) --      C  U                  - UUA                  A              C   C
  CUAAAG UC GAGCAUUAGCGGUGCUUU C   AAAACGCCGCUAAAGCUC GAGCAUUAGCGGUG UUU U
  |||||| || |||||||||||||||||| |   |||||||||||||||||| |||||||||||||| |||
  GAUUUU AG UUCGUAAUCGCCGCGAAA G   UUUUGCGGCGAUUUCGAG CUCGUAAUCGCCGC AAA U
GC      U  -                  U -UG                  -              A   A
Stem-loop sequence CUAAAGCUCUGAGCAUUAGCGGUGCUUUCUUAAAAACGCCGCUAAAGCUCAGAGCAUUAGCGGUGCUUUCUUAAAAACGCCGCUAAUGCUCGAGCUUUAGCGGCGUUUUGUGUAAAGCGCCGCUAAUGCUUGAUUUUUAGCG