ncRNA ID | novel_gra_miR126 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr3:6949295-6949375 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGGUGCUUAUCUGAUAGGCGGCA - 24 |
Stem-loop(if miRNA) |
--   G        U        G        ACC        GUG UGCUUAUC GAUAGGCG CACCAGUG   CCUAUC   ||| |||||||| |||||||| ||||||||   |||||U   CAC GCGAAUAG CUAUCCGU GUGGUCAC   GGAUAC CA   G        U        G        GAC      |
Stem-loop sequence | GUGGUGCUUAUCUGAUAGGCGGCACCAGUGACCCCUAUCUCAUAGGCAGCACUGGUGGUGCCUAUCUGAUAAGCGGCACAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012632413.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105801078 (LOC105801078), mRNA | uncharacterized LOC105801078(LOC105801078) | coding protein | psRNATarget |