ncRNA ID | novel_gra_miR122 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr3:14451543-14451633 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 71 - UUUGGUCCUUGCACUUGGCAA - 91 |
Stem-loop(if miRNA) |
--      C     A                       UAUCAUA   UUUGGU CUUGC CUUGGCAAAUGUAAAAGUUUGAU       G   |||||| ||||| |||||||||||||||||||||||       U   AAACCA GAACG GAACCGUUUACAUUUUCAAACUA       G UG      U     A                       CUACACC |
Stem-loop sequence | UUUGGUCCUUGCACUUGGCAAAUGUAAAAGUUUGAUUAUCAUAGUGCCACAUCAUCAAACUUUUACAUUUGCCAAGAGCAAGUACCAAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012613432.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105786966 (LOC105786966), mRNA | uncharacterized LOC105786966(LOC105786966) | coding protein | psRNATarget | |||||||||
XM_012613559.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105787114 (LOC105787114), mRNA | uncharacterized LOC105787114(LOC105787114) | coding protein | psRNATarget |