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BaseInfo

ncRNA ID	novel_gra_miR114
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr3:32353708-32353808 [-]
Reference genome	Graimondii2_0
Source	SRR616255
Length	22
Mature sequence(if miRNA)	1 - UGAUGGGCCUGCAUCGUCGUCC - 22
Stem-loop(if miRNA)	--GU   U   U   U    -   U  -    UG -      AA     G UG     GAC GUG CGG GCUC UCG UG GGCC  G UGAUUA  UGGCC C  A     ||| ||| ||| |||| ||| || ||||  | ||||||  ||||| |  U     CUG UAC GUC CGGG AGU GC CCGG  C GUUAGU  GUCGG G  G CCUG   C   -   -    U   U  U    GU U      GG     - UA
Stem-loop sequence	GUGACUGUGUCGGUGCUCUCGUUGGGCCUGGUGAUUAAAUGGCCGCUGAUGAUGGGCUGGGUGAUUGUCUGGGCCUCGUUGAUGGGCCUGCAUCGUCGUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012625755.1	ncRNA:22   CCUGCUGCUACGUCCGGGUAGU   1   |||||||||||||*|||||||| targets:475   GGACGACGAUGCAAGCCCAUCA   496 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105796152 (LOC105796152), mRNA	uncharacterized LOC105796152(LOC105796152)	coding protein	psRNATarget
XM_012593583.1	ncRNA:22   CCUGCUGCUACGUCCGGGUAGU   1   |||||||||*|||||||||||| targets:472   GGACGACGACGCAGGCCCAUCA   493 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X2, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget
XM_012593582.1	ncRNA:22   CCUGCUGCUACGUCCGGGUAGU   1   |||||||||*|||||||||||| targets:482   GGACGACGACGCAGGCCCAUCA   503 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii extensin-like (LOC105772282), transcript variant X1, mRNA	extensin-like(LOC105772282)	coding protein	psRNATarget