ncRNA ID | novel_gra_miR112 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:32797178-32797387 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 187 - ACUAAUGCUCAGGGCUUUAGCGGC - 210 |
Stem-loop(if miRNA) |
--A    U    A    U               G     U      A   AA --AU    C  -AU    C    UUA  A    UCAG -GA   A          U    CUAA GCUC GGGC UUAGCGGCGUUUUUU AGAAA CGCCGC AAA  C    AAGC CA   GACG CAUU   UG GCUU    G   UUU GCGGUGUUUU G    |||| |||| |||| ||||||||||||||| ||||| |||||| |||  |    |||| ||   |||| ||||   || ||||    |   ||| ||||||||||    GAUU UGGG CUCG AAUCGUUGCGAAGGA UUUUU GCGGCG UUU  G    UUCG GU   UUGC GUAG   AC CGAA    C   AAA CGCCGCGAAA G GGC    U    A    U               A     -      A   AG GGCU    A  GUU    U    -CA  C    --UA AAA   A          C |
Stem-loop sequence | ACUAAUGCUCAGGGCUUUAGCGGCGUUUUUUGAGAAAUCGCCGCAAAAAACAUAAGCCCAAUGACGCCAUUUUAUGAGCUUUCAGGGAUUUAGCGGUGUUUUUGGCAAAGCGCCGCAAAAAAACAUAAGCCCAACGAUGUCGUUUUGUGAGCUUUCGGGGAUUUAGCGGCGUUUUUAAGGAAGCGUUGCUAAUGCUCAGGGUUUUAGCGG |