ncRNA ID | novel_gra_miR110 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr3:37031475-37031706 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAAUGCUCUGGCUUUUAGCGGCG - 24 |
Stem-loop(if miRNA) |
--         AU   -  UU          U       U          A  -AUUG   UU    C          AAAU      G      A  G GC      C GU   UUU   CCGCUAAAG  CGG GC  UUAGCGGCGU UUUUAAA AGCGCCGCUA AG     GGC  UUAG GGCGUUUUUU    AGUGCC CUAAAG UU G  UUUUAG G  GUU   U   |||||||||  ||| ||  |||||||||| ||||||| |||||||||| ||     |||  |||| ||||||||||    |||||| |||||| || |  |||||| |  |||   GGCGAUUUU  GUC CG  AAUCGCCGCG AAAAUUU UUGCGGCGAU UC     UCG  AAUC CCGCGAAAAA    UUACGG GAUUUU GG C  GAAAUC C  CGA   A GC         CG   U  -U          U       U          G  GAGAA   -U    A          GUUU      A      C  G UA      A UG   UAA |
Stem-loop sequence | CCGCUAAAGAUCGGGCUUUUAGCGGCGUUUUUUAAAUAGCGCCGCUAAAGAUUGGGCUUUUAGCGGCGUUUUUUAAAUAGUGCCGCUAAAGAUUGGGCUUUUAGCGGUGUUUUUUAAAUAGCGUCACUAAAGAUCGGGCUUUUAGAGGCAUUUUUGAAAAAGCGCCACUAAUGCUAAGAGCUGUAGCGGCGUUUUUUAAAAUGCGCCGCUAAUGCUCUGGCUUUUAGCGGCG |