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BaseInfo

ncRNA ID novel_gra_miR110
Species Gossypium raimondii
Class miRNA
Genome position Chr3:37031475-37031706 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - CUAAUGCUCUGGCUUUUAGCGGCG - 24
Stem-loop(if miRNA) --         AU   -  UU          U       U          A  -AUUG   UU    C          AAAU      G      A  G GC      C GU   UUU
  CCGCUAAAG  CGG GC  UUAGCGGCGU UUUUAAA AGCGCCGCUA AG     GGC  UUAG GGCGUUUUUU    AGUGCC CUAAAG UU G  UUUUAG G  GUU   U
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  GGCGAUUUU  GUC CG  AAUCGCCGCG AAAAUUU UUGCGGCGAU UC     UCG  AAUC CCGCGAAAAA    UUACGG GAUUUU GG C  GAAAUC C  CGA   A
GC         CG   U  -U          U       U          G  GAGAA   -U    A          GUUU      A      C  G UA      A UG   UAA
Stem-loop sequence CCGCUAAAGAUCGGGCUUUUAGCGGCGUUUUUUAAAUAGCGCCGCUAAAGAUUGGGCUUUUAGCGGCGUUUUUUAAAUAGUGCCGCUAAAGAUUGGGCUUUUAGCGGUGUUUUUUAAAUAGCGUCACUAAAGAUCGGGCUUUUAGAGGCAUUUUUGAAAAAGCGCCACUAAUGCUAAGAGCUGUAGCGGCGUUUUUUAAAAUGCGCCGCUAAUGCUCUGGCUUUUAGCGGCG