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BaseInfo

ncRNA ID novel_gra_miR97
Species Gossypium raimondii
Class miRNA
Genome position Chr2:35681539-35681648 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 21
Mature sequence(if miRNA) 1 - GGCCUUUGUAUUAGGAGUCGG - 21
Stem-loop(if miRNA) --                A    C   A  C U      -UUUG   GA    AUA
  GACUUCUAGUACAGAG CCUC AUG UA U UUACCA     GAU  UGAU   U
  |||||||||||||||| |||| ||| || | ||||||     |||  ||||
  CUGAGGAUUAUGUUUC GGAG UAC AU A AAUGGU     UUA  ACUG   U
GG                C    A   C  A C      UGGUA   -A    AUC
Stem-loop sequence GACUUCUAGUACAGAGACCUCCAUGAUACUUUUACCAUUUGGAUGAUGAUAUAUUCUAGUCAAAUUAUGGUUGGUAACAAUACCAUAGAGGCCUUUGUAUUAGGAGUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012625335.1
ncRNA:21   GGCUGAGGAUUAUGUUUCCGG   1
  ||*|||||||||||||=||||
targets:1897   CCAACUCCUAAUACAAGGGCC   1917

2.5 PREDICTED: Gossypium raimondii auxin-binding protein ABP19a-like (LOC105795634), mRNA auxin-binding protein ABP19a-like(LOC105795634) coding protein psRNATarget