ncRNA ID | novel_gra_miR97 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr2:35681539-35681648 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GGCCUUUGUAUUAGGAGUCGG - 21 |
Stem-loop(if miRNA) |
--                A    C   A  C U      -UUUG   GA    AUA   GACUUCUAGUACAGAG CCUC AUG UA U UUACCA     GAU  UGAU   U   |||||||||||||||| |||| ||| || | ||||||     |||  ||||   CUGAGGAUUAUGUUUC GGAG UAC AU A AAUGGU     UUA  ACUG   U GG                C    A   C  A C      UGGUA   -A    AUC |
Stem-loop sequence | GACUUCUAGUACAGAGACCUCCAUGAUACUUUUACCAUUUGGAUGAUGAUAUAUUCUAGUCAAAUUAUGGUUGGUAACAAUACCAUAGAGGCCUUUGUAUUAGGAGUCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012625335.1 |
|
2.5 | PREDICTED: Gossypium raimondii auxin-binding protein ABP19a-like (LOC105795634), mRNA | auxin-binding protein ABP19a-like(LOC105795634) | coding protein | psRNATarget |