ncRNA ID | novel_gra_miR90 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr8:27017345-27017411 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUAUAGAACAUGACCUUUAGCGG - 24 |
Stem-loop(if miRNA) |
--    U   A    AC           C   AC   GUUA AGA CAUG  CUUUAGCGGUG UUU  C   |||| ||| ||||  ||||||||||| |||   CGAU UCU GUAC  GAAAUCGCCGC AAA  C GG    U   A    AA           -   CA |
Stem-loop sequence | GUUAUAGAACAUGACCUUUAGCGGUGCUUUACCCACAAACGCCGCUAAAGAACAUGAUCUUUAGCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012598639.1 |
|
2.0 | PREDICTED: Gossypium raimondii protein NEDD1-like (LOC105776140), mRNA | protein NEDD1-like(LOC105776140) | coding protein | psRNATarget |