| ncRNA ID | novel_gra_miR87 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr2:60303243-60303429 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616255 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUUGUAUGAAACUGUGAUUUCAUG - 24 |
| Stem-loop(if miRNA) |
-- A A G CU AAAAUUCAAAACCA AUUGUAUGAAACUGUGAUUUCAUGUCAUUCCUAUC CUUUCAA UAGGAGCAU ACAAAUCAGAUUUU CUCCUGA A ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| C UAACAUACUUUGACACUAAGGUACAGUAAGGAUAG GAAAGUU AUCCUCGUA UGUUUAGUCUAAAA GAGGACU U CA G A A AG AAAAUUUGUAAAAA |
| Stem-loop sequence | AUUGUAUGAAACUGUGAUUUCAUGUCAUUCCUAUCACUUUCAAAUAGGAGCAUGACAAAUCAGAUUUUCUCUCCUGAAAAAUUCAAAACCAACUAAAAAUGUUUAAAAUCAGGAGGAAAAAUCUGAUUUGUAAUGCUCCUAAUUGAAAGGGAUAGGAAUGACAUGGAAUCACAGUUUCAUACAAUAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012613692.1 |
|
1.5 | PREDICTED: Gossypium raimondii probable WRKY transcription factor 9 (LOC105787323), mRNA | probable WRKY transcription factor 9(LOC105787323) | coding protein | psRNATarget | |||||||||
| XM_012610392.1 |
|
3.0 | PREDICTED: Gossypium raimondii pentatricopeptide repeat-containing protein At3g13880 (LOC105784486), transcript variant X1, mRNA | pentatricopeptide repeat-containing protein At3g13880(LOC105784486) | coding protein | psRNATarget |