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BaseInfo

ncRNA ID	novel_gra_miR85
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr2:42701768-42701966 [+]
Reference genome	Graimondii2_0
Source	SRR616255;SRR616256
Length	24
Mature sequence(if miRNA)	1 - AUGAAACUGUGAUUCCAUGUCAUC - 24
Stem-loop(if miRNA)	--                           A     GUC      A                    U            A  UU    ----UCUC     AA   AUGAAACUGUGAUUCCAUGUCAUCUUU UCCCU   CAAUGU AGAAUGACAAAUCAGAUUUU CUUUUGAUUUUU GC  UUUU        UUGAA  A   ||||||||||||||||||||||||||| |||||   |||||| |||||||||||||||||||| |||||||||||| ||  ||||        |||||   UACUUUGACACUAAGGUGUAGUAGAAA AGGGA   GUUACA UCUUACUGUUUAGUCUAAAG GAGGACUAAAAG UG  AAAA        AACUU  A CA                           C     AAA      C                    -            A  UU    UCAACCUA     AA
Stem-loop sequence	AUGAAACUGUGAUUCCAUGUCAUCUUUAUCCCUGUCCAAUGUAAGAAUGACAAAUCAGAUUUUUCUUUUGAUUUUUAGCUUUUUUUCUCUUGAAAAAAAAUUCAAAUCCAACUAAAAUUGUAGAAAAUCAGGAGGAAAUCUGAUUUGUCAUUCUCACAUUGAAAAGGGACAAAGAUGAUGUGGAAUCACAGUUUCAUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012613692.1	ncRNA:24   CUACUGUACCUUAGUGUCAAAGUA   1   *||||||||||||||||||||=|| targets:1701   AAUGACAUGGAAUCACAGUUUUAU   1724 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii probable WRKY transcription factor 9 (LOC105787323), mRNA	probable WRKY transcription factor 9(LOC105787323)	coding protein	psRNATarget