ncRNA ID | novel_gra_miR66 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:38036935-38037148 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 191 - CUAAAGCUCUGAGCAUUAGCAGCG - 214 |
Stem-loop(if miRNA) |
--      C  U          A        CC                CUC               C     CA    -   G  -U      CCGAA     AAAA    A   CUAAAG UC GAGCAUUAGC GCGCUUUU  AAAAACGUCGCUAAAG   UGAGCAUUAGCGGCG UUUUU  AAAA CGC GC  AAAGCC     AGGUC    AACG U   |||||| || |||||||||| ||||||||  ||||||||||||||||   ||||||||||||||| |||||  |||| ||| ||  ||||||     |||||    ||||   GAUUUC AG CUCGUAAUCG CGCGAAAA  UUUUUGCGGCGAUUUU   ACUCGUAAUUGCUGC AAGAA  UUUU GCG CG  UUUUGG     UUCGG    UUGC G GC      U  -          C        AC                --U               A     UC    C   G  UU      ----A     ---G    U |
Stem-loop sequence | CUAAAGCUCUGAGCAUUAGCAGCGCUUUUCCAAAAACGUCGCUAAAGCUCUGAGCAUUAGCGGCGCUUUUUCAAAAACGCGGCUAAAGCCCCGAAAGGUCAAAAAACGAUGUCGUUGGGCUUAGGUUUUUUGCGGCGCUUUUCUAAGAAACGUCGUUAAUGCUCAUUUUUAGCGGCGUUUUUCAAAAAGCGCCGCUAAUGCUCGAUCUUUAGCG |