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BaseInfo

ncRNA ID novel_gra_miR56
Species Gossypium raimondii
Class miRNA
Genome position Chr10:52414533-52414645 [-]
Reference genome Graimondii2_0
Source SRR616255;SRR616257
Length 24
Mature sequence(if miRNA) 1 - AAUGCUCUGGGCUUUAGCGGCGUU - 24
Stem-loop(if miRNA) --         U         U        U    UGA        C     UG U
  CGCCGCUAA GCUCGGGGC UUAGCGGC UUUU   AAAAGCGC GCUAA  C C
  ||||||||| ||||||||| |||||||| ||||   |||||||| |||||  | U
  GCGGCGAUU CGGGUCUCG AAUCGCCG GAAA   UUUUUGCG CGAUU  G G
UU         U         U        C    UAG        A     UA G
Stem-loop sequence CGCCGCUAAUGCUCGGGGCUUUAGCGGCUUUUUUGAAAAAGCGCCGCUAAUGCUCUGGGAUUUAGCAGCGUUUUUGAUAAAGCGCCGCUAAUGCUCUGGGCUUUAGCGGCGUU