ncRNA ID | novel_gra_miR55 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:54375813-54375972 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616256;SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 140 - ACAUGGUCUUUAGUGGCGCUU - 160 |
Stem-loop(if miRNA) |
--A            A    G                              C      C                C   G    CGCCACUAAAGA CAUG UCUUUAGCGGCGCUUAGAAAAAGACGUUGC AAAGAC AUGUUCUUUAGCGGCG UUU A    |||||||||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||    GCGGUGAUUUCU GUAC AGAAAUCGCCGCGAAUCUUUUUUUGCGACG UUUCUG UACGAGAAAUCGCCGC AAG A UUC            G    A                              A      U                A   A |
Stem-loop sequence | ACGCCACUAAAGAACAUGGUCUUUAGCGGCGCUUAGAAAAAGACGUUGCCAAAGACCAUGUUCUUUAGCGGCGCUUUGAAAGAAACGCCGCUAAAGAGCAUUGUCUUUAGCAGCGUUUUUUUCUAAGCGCCGCUAAAGAACAUGGUCUUUAGUGGCGCUU |