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BaseInfo

ncRNA ID novel_gra_miR55
Species Gossypium raimondii
Class miRNA
Genome position Chr1:54375813-54375972 [+]
Reference genome Graimondii2_0
Source SRR616255;SRR616256;SRR616257
Length 21
Mature sequence(if miRNA) 140 - ACAUGGUCUUUAGUGGCGCUU - 160
Stem-loop(if miRNA) --A            A    G                              C      C                C   G
   CGCCACUAAAGA CAUG UCUUUAGCGGCGCUUAGAAAAAGACGUUGC AAAGAC AUGUUCUUUAGCGGCG UUU A
   |||||||||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||
   GCGGUGAUUUCU GUAC AGAAAUCGCCGCGAAUCUUUUUUUGCGACG UUUCUG UACGAGAAAUCGCCGC AAG A
UUC            G    A                              A      U                A   A
Stem-loop sequence ACGCCACUAAAGAACAUGGUCUUUAGCGGCGCUUAGAAAAAGACGUUGCCAAAGACCAUGUUCUUUAGCGGCGCUUUGAAAGAAACGCCGCUAAAGAGCAUUGUCUUUAGCAGCGUUUUUUUCUAAGCGCCGCUAAAGAACAUGGUCUUUAGUGGCGCUU