ncRNA ID | novel_gra_miR54 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:51810031-51810174 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGUCCUGGUCUUUAGUGGCGUU - 24 |
Stem-loop(if miRNA) |
-    U  -U GU              GUGUGAA              GU UU GU              GU  AAGG CC  G  CUUUAGUGGCGUUU       AAGCGCCGCUAAAG  C  G  CUUUAGCGGCGUUU  G  |||| ||  |  ||||||||||||||       ||||||||||||||  |  |  ||||||||||||||  UUUC GG  C  GAAAUCGCCGCGAA       UUUGCGGCGAUUUC  G  C  GAAAUCGCCGCGAA  G A    U  UU UG              AAGGGUG              UG UU UG              AG |
Stem-loop sequence | AAGGUCCUGGUCUUUAGUGGCGUUUGUGUGAAAAGCGCCGCUAAAGGUCUUGGUCUUUAGCGGCGUUUGUGGGAAAGCGCCGCUAAAGGUCUUGGUCUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCUUGGUCUUUA |