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BaseInfo

ncRNA ID novel_gra_miR52
Species Gossypium raimondii
Class miRNA
Genome position Chr1:48440881-48441039 [+]
Reference genome Graimondii2_0
Source SRR616255;SRR616257
Length 24
Mature sequence(if miRNA) 136 - AAAGGUCAUGGUCUUUAGUGGCGU - 159
Stem-loop(if miRNA) --          GU    GU              G GG  A                C                   GU
  GCCGCUAAAG  CAUG  CUUUAGCGGCGUUU U  UA AAGCGCCGCUAAAGAC AUGUUCUUUAGCGGCGUUU  G
  ||||||||||  ||||  |||||||||||||| |  || |||||||||||||||| |||||||||||||||||||  G
  CGGUGAUUUC  GUAC  GAAAUCGCCGCGAA A  GU UUUGCGGCGAUUUCUG UACAAGAAAUCGCCGCGAA  G
UG          UG    UG              G GG  G                U                   AA
Stem-loop sequence GCCGCUAAAGGUCAUGGUCUUUAGCGGCGUUUGUGGUAAAAGCGCCGCUAAAGACCAUGUUCUUUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGAACAUUGUCUUUAGCGGCGUUUGUGGGAGAAGCGCCGCUAAAGGUCAUGGUCUUUAGUGGCGU