ncRNA ID | novel_gra_miR49 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr13:15982409-15982562 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGCUCUGGGCUUUAGCGGCGUU - 24 |
Stem-loop(if miRNA) |
--U        U       U U              -      G   CA    U    G    U             U    GCCGCUAA GCUCAGA C UUAGCGGUGUUUUU GGAAAA CGC  CUAA GCUC GGGC UUAGCGGCGUUUU U    |||||||| ||||||| | |||||||||||||| |||||| |||  |||| |||| |||| |||||||||||||    CGGCGAUU CGGGUCU G AAUCGCCGCGAAGA CCUUUU GCG  GAUU CGGG CUCG AAUCGCCGCGAAG A UUG        U       C U              A      -   AC    U    G    U             A |
Stem-loop sequence | UGCCGCUAAUGCUCAGAUCUUUAGCGGUGUUUUUGGAAAAGCGCCACUAAUGCUCGGGGCUUUAGCGGCGUUUUUUAAGAAGCGCCGCUAAUGCUCGGGGCUUUAGCAGCGUUUUCCAAGAAGCGCCGCUAAUGCUCUGGGCUUUAGCGGCGUU |