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BaseInfo

ncRNA ID novel_gra_miR46
Species Gossypium raimondii
Class miRNA
Genome position Chr7:4085976-4086202 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - GUUAAUGCUCUGGUCUUUAGCGGC - 24
Stem-loop(if miRNA) -- A           -                  A        A      A  G   --              -       G    A         -U   CU    C        U
  C CUAAAGAUCGG GUAUUAGCGGCGCUUUUU GAAAACGC GCUAAA AU AGA  AUUAGCGGCGUUUU CCAAAAA CGCC CUAAAGAUC  GGU  UUAG GGCGUUUU G
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  G GAUUUCUGGUC CGUAAUUGCUGCGAAAGA UUUUUGCG CGAUUU UG UCU  UAAUCGCCGCGAAA GGUUUUU GCGG GAUUUCUGG  UCG  AAUC CCGCGAAA G
CG C           U                  G        G      C  G   CG              A       -    C         UC   -U    A        A
Stem-loop sequence CACUAAAGAUCGGGUAUUAGCGGCGCUUUUUAGAAAACGCAGCUAAAAAUGAGAAUUAGCGGCGUUUUCCAAAAAGCGCCACUAAAGAUCUGGUCUUUAGCGGCGUUUUUGGAAAAGCGCCACUAAUGCUCUGGUCUUUAGCGGCGUUUUUGGAAAAGCGCCGCUAAUGCUCUGGUCUUUAGCGGCGUUUUUGAGAAAGCGUCGUUAAUGCUCUGGUCUUUAGCGGC