ncRNA ID | novel_gra_miR46 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:4085976-4086202 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUAAUGCUCUGGUCUUUAGCGGC - 24 |
Stem-loop(if miRNA) |
-- A           -                  A        A      A  G   --              -       G    A         -U   CU    C        U   C CUAAAGAUCGG GUAUUAGCGGCGCUUUUU GAAAACGC GCUAAA AU AGA  AUUAGCGGCGUUUU CCAAAAA CGCC CUAAAGAUC  GGU  UUAG GGCGUUUU G   | ||||||||||| |||||||||||||||||| |||||||| |||||| || |||  |||||||||||||| ||||||| |||| |||||||||  |||  |||| ||||||||   G GAUUUCUGGUC CGUAAUUGCUGCGAAAGA UUUUUGCG CGAUUU UG UCU  UAAUCGCCGCGAAA GGUUUUU GCGG GAUUUCUGG  UCG  AAUC CCGCGAAA G CG C           U                  G        G      C  G   CG              A       -    C         UC   -U    A        A |
Stem-loop sequence | CACUAAAGAUCGGGUAUUAGCGGCGCUUUUUAGAAAACGCAGCUAAAAAUGAGAAUUAGCGGCGUUUUCCAAAAAGCGCCACUAAAGAUCUGGUCUUUAGCGGCGUUUUUGGAAAAGCGCCACUAAUGCUCUGGUCUUUAGCGGCGUUUUUGGAAAAGCGCCGCUAAUGCUCUGGUCUUUAGCGGCGUUUUUGAGAAAGCGUCGUUAAUGCUCUGGUCUUUAGCGGC |