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BaseInfo

ncRNA ID novel_gra_miR42
Species Gossypium raimondii
Class miRNA
Genome position Chr10:56392489-56392638 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - ACUCAUUUGGACUGCCAUGUAGGA - 24
Stem-loop(if miRNA) --                                         A   AGA   UC  --AUGA    A      UAA
  CUACGUGGCAGUCCAAAUGAGUUUUAAAUGCCAACUUGGAU UCC   UGC  GG      AAAU GAUUUU   U
  ||||||||||||||||||||||||||||||||||||||||| |||   |||  ||      |||| ||||||   U
  GAUGUACCGUCAGGUUUACUCAAAAUUUACGGUUGAAUCUA AGG   AUG  CC      UUUA UUAAAA   A
AG                                         C   ---   CA  GUUAGG    A      UAA
Stem-loop sequence CUACGUGGCAGUCCAAAUGAGUUUUAAAUGCCAACUUGGAUAUCCAGAUGCUCGGAUGAAAAUAGAUUUUUAAUUAAAUAAAAUUAAUUUGGAUUGCCACGUAGGACAUCUAAGUUGGCAUUUAAAACUCAUUUGGACUGCCAUGUAGGA