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BaseInfo

ncRNA ID novel_gra_miR39
Species Gossypium raimondii
Class miRNA
Genome position Chr13:49400723-49400846 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - AGGGACGCGUUUUCCUGCCACGUC - 24
Stem-loop(if miRNA) C   -    ---                               U      UCAAG   -   C
 ACG GGCA   AAACGCGUCCUUGAGGAAGCGUUUUGCCUAC UGGACA     CGC GUC U
 ||| ||||   ||||||||||||||||||||||||||||||| ||||||     ||| ||| U
 UGC CCGU   UUUGCGCAGGGACUCCUUCGCAAAACGGAUG ACCUGU     GCG CGG G
C   A    CCU                               C      UUUUA   G   A
Stem-loop sequence CACGGGCAAAACGCGUCCUUGAGGAAGCGUUUUGCCUACUUGGACAUCAAGCGCGUCCUUGAGGCGGCGAUUUUUGUCCACGUAGGCAAAACGCUUCCUCAGGGACGCGUUUUCCUGCCACGUC