ncRNA ID | novel_gra_miR29 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr13:57043112-57043272 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGGUCACUCUGCCGUUAAGAUC - 24 |
Stem-loop(if miRNA) |
--       A                C       UU   A U       A                         --U  U   AAUGGUC CUCUGCCGUUAAGAUC GUUACCU  CAA C GCAAUUC AUGUGGCAGUUAAAAUGGGUUUUAA   UC C   ||||||| |||||||||||||||| |||||||  ||| | ||||||| |||||||||||||||||||||||||   || A   UUACCAG GAGAUGGUAAUUCUAG CAAUGGA  GUU G CGUUAGG UGCAUUGUCAAUUUUACUCAAAAUU   GG U CU       G                A       GG   G C       C                         UAC  U |
Stem-loop sequence | AAUGGUCACUCUGCCGUUAAGAUCCGUUACCUUUCAAACUGCAAUUCAAUGUGGCAGUUAAAAUGGGUUUUAAUUCUCAUUGGCAUUUAAAACUCAUUUUAACUGUUACGUCGGAUUGCCGGUUGGGAGGUAACAGAUCUUAAUGGUAGAGGGACCAUUUC |