ncRNA ID | novel_gra_miR28 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr13:54933068-54933242 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 152 - CUACGUAGGACUGUCGUUAGGGCG - 175 |
Stem-loop(if miRNA) |
--                                                          ----CUAC    -----U   C A       U   CCCUAACGACAGUCCUACGUGGCAGUCUAAAUGAGUUUUAAAUGUCAACUUGAAUGUC        AUGA      GGU U AAUUAAA U   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||      ||| | |||||||   GGGAUUGCUGUCAGGAUGCAUCGUCAGGUUUACUCAAAAUUUACAGUUGAACUUACAG        UACU      CCA A UUAAUUU U GC                                                          UUUAACUC    UUUAUU   A A       A |
Stem-loop sequence | CCCUAACGACAGUCCUACGUGGCAGUCUAAAUGAGUUUUAAAUGUCAACUUGAAUGUCCUACAUGAUGGUCUAAAUUAAAUUUAUUUAAUUAAAACCUUAUUUUCAUCUCAAUUUGACAUUCAAGUUGACAUUUAAAACUCAUUUGGACUGCUACGUAGGACUGUCGUUAGGGCG |