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BaseInfo

ncRNA ID novel_gra_miR28
Species Gossypium raimondii
Class miRNA
Genome position Chr13:54933068-54933242 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 152 - CUACGUAGGACUGUCGUUAGGGCG - 175
Stem-loop(if miRNA) --                                                          ----CUAC    -----U   C A       U
  CCCUAACGACAGUCCUACGUGGCAGUCUAAAUGAGUUUUAAAUGUCAACUUGAAUGUC        AUGA      GGU U AAUUAAA U
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||      ||| | |||||||
  GGGAUUGCUGUCAGGAUGCAUCGUCAGGUUUACUCAAAAUUUACAGUUGAACUUACAG        UACU      CCA A UUAAUUU U
GC                                                          UUUAACUC    UUUAUU   A A       A
Stem-loop sequence CCCUAACGACAGUCCUACGUGGCAGUCUAAAUGAGUUUUAAAUGUCAACUUGAAUGUCCUACAUGAUGGUCUAAAUUAAAUUUAUUUAAUUAAAACCUUAUUUUCAUCUCAAUUUGACAUUCAAGUUGACAUUUAAAACUCAUUUGGACUGCUACGUAGGACUGUCGUUAGGGCG