Search result

BaseInfo

ncRNA ID novel_gra_miR27
Species Gossypium raimondii
Class miRNA
Genome position Chr13:46902424-46902483 [+]
Reference genome Graimondii2_0
Source SRR616255;SRR616256;SRR616257
Length 24
Mature sequence(if miRNA) 37 - AAAGCGCUCUGACGUGGACGCGAU - 60
Stem-loop(if miRNA) -      CUUGUAGGCGCGAUUUGUGUCC
 CGCGUC                      A
 ||||||                      C
 AGCGCA                      G
U      GGUGCAGUCUCGCGAAACGAAU
Stem-loop sequence CGCGUCCUUGUAGGCGCGAUUUGUGUCCACGUAAGCAAAGCGCUCUGACGUGGACGCGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012622070.1
ncRNA:24   UAGCGCAGGUGCAGUCUCGCGAAA   1
  ||||||||||||||||*||||||*
targets:1130   AUCGCGUCCACGUCAGCGCGCUUA   1153

2.5 PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA uncharacterized LOC105793143(LOC105793143) coding protein psRNATarget