ncRNA ID | novel_gra_miR26 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr13:45286333-45286470 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACCAAAACGCAUCGUUCUGGGUUG - 24 |
Stem-loop(if miRNA) |
---A C - CUG A GAAUUAG AAGAAAAAA C C CCAAAACG AU CGUU GGUUGAGGU UUUUA UGGCGCUU CGCUGCUAA G A |||||||| || |||| ||||||||| ||||| |||||||| ||||||||| | C GGUUUUGC UA GCAA CCAAUUCUA AAAAU GCCGCGAA GCGGCGAUU C A GUUG - C -AA A ------- ACAUACUAC A C |
Stem-loop sequence | ACCAAAACGCAUCGUUCUGGGUUGAGGUAUUUUAGAAUUAGUGGCGCUUAAGAAAAAACGCUGCUAACGCACACCAUUAGCGGCGCAUCAUACAAAGCGCCGUAAAAAAUCUUAACCAAAACGCAUCGUUUUGGGUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012621017.1 |
|
2.5 | PREDICTED: Gossypium raimondii translation machinery-associated protein 22-like (LOC105792407), mRNA | translation machinery-associated protein 22-like(LOC105792407) | coding protein | psRNATarget |