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BaseInfo

ncRNA ID	novel_gra_miR20
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr13:31280829-31280914 [+]
Reference genome	Graimondii2_0
Source	SRR616255;SRR616257
Length	24
Mature sequence(if miRNA)	63 - AUGUCUGAGACAUGGCUUUGGCAU - 86
Stem-loop(if miRNA)	--C   U   A        G        -----      CACCGAU   A    CCG AAG CCAUGUCU GGACAUGG     CAUGGG       AUG G    ||| ||| |||||||| ||||||||     ||||||       |||    GGU UUC GGUACAGA UCUGUACC     GUACCC       UAC A UAC   -   -        G        AGAAU      -------   A
Stem-loop sequence	CCCGUAAGACCAUGUCUGGGACAUGGCAUGGGCACCGAUAUGAGAACAUCCCAUGUAAGACCAUGUCUGAGACAUGGCUUUGGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012611163.1	ncRNA:24   UACGGUUUCGGUACAGAGUCUGUA   1   **||||*||*|||||||||||||| targets:631   UGGCCAUAGACAUGUCUCAGACAU   654 Target Full Sequence	2.0	PREDICTED: Gossypium raimondii transcription factor bHLH95-like (LOC105785208), mRNA	transcription factor bHLH95-like(LOC105785208)	coding protein	psRNATarget
XM_012602974.1	ncRNA:24   UACGGUUUCGGUACAGAGUCUGUA   1   |**|*|||||||||||||||||** targets:151   AAACAAAAGCCAUGUCUCAGACUG   174 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii copper transport protein CCH-like (LOC105779205), transcript variant X2, mRNA	copper transport protein CCH-like(LOC105779205)	coding protein	psRNATarget
XM_012602973.1	ncRNA:24   UACGGUUUCGGUACAGAGUCUGUA   1   |**|*|||||||||||||||||** targets:148   AAACAAAAGCCAUGUCUCAGACUG   171 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii copper transport protein CCH-like (LOC105779205), transcript variant X1, mRNA	copper transport protein CCH-like(LOC105779205)	coding protein	psRNATarget