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BaseInfo

ncRNA ID novel_gra_miR13
Species Gossypium raimondii
Class miRNA
Genome position Chr7:8202745-8202953 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 21
Mature sequence(if miRNA) 1 - UACUGAUACUUGCUAUUGACA - 21
Stem-loop(if miRNA) --    A  A                       --UAAUUUUU  C      AGG            A   C           --                  UUU
  UCAA AG AGGUAUCAGUAUACGAAAAAAGU          UU GUGGUG   UGCUAAUAGCCG CAC ACCUUUUUUGU  GAAUUUUUUUUUUACUUU   C
  |||| || |||||||||||||||||||||||          || ||||||   |||||||||||| ||| |||||||||||  ||||||||||||||||||   A
  AGUU UC UUCAUAGUCAUAUGCUUUUUUCA          AA CACCAC   ACGGUUAUCGGC GUG UGGAAAAAACA  CUUAAAAAAAAAAUGAAA   U
AC    A  G                       UUUUUUUUUU  A      CGG            C   U           UC                  CUG
Stem-loop sequence UCAAAAGAAGGUAUCAGUAUACGAAAAAAGUUAAUUUUUUUCGUGGUGAGGUGCUAAUAGCCGACACCACCUUUUUUGUGAAUUUUUUUUUUACUUUUUUCAUGUCAAAGUAAAAAAAAAAUUCCUACAAAAAAGGUUGUGCCGGCUAUUGGCAGGCCACCACAAAUUUUUUUUUUACUUUUUUCGUAUACUGAUACUUGCUAUUGACA