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BaseInfo

ncRNA ID novel_gra_miR12
Species Gossypium raimondii
Class miRNA
Genome position Chr1:28227916-28228026 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - GGUGGAGCCAUAGAGAAUGACGCC - 24
Stem-loop(if miRNA) --   G      U        A G      CCUUC    UU UU          UA
  GGU GAGCCA AGAGAAUG C CCACCA     AGAU  U  UUUUAGUUUU  A
  ||| |||||| |||||||| | ||||||     ||||  |  ||||||||||
  CCA UUCGGU UCUCUUAC G GGUGGU     UUUA  A  AAAAUCAAAA  U
AA   G      U        C A      -UUUA    UU UU          UU
Stem-loop sequence GGUGGAGCCAUAGAGAAUGACGCCACCACCUUCAGAUUUUUUUUUUAGUUUUUAAUUUAAAACUAAAAUUAUUAUUUAUUUUGGUGGAGCCAUUCUCUUUGGCUUGACCAA