ncRNA ID | novel_gra_miR11 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:3455262-3455342 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 22 |
Mature sequence(if miRNA) | 60 - GCUCACUUCUCUUUCUGUCAGC - 81 |
Stem-loop(if miRNA) |
--        -    -        A        CAU    AA   UGACAGAA GAGA GUGAGCAC CAAAGGCA   GUAU  G   |||||||| |||| |||||||| ||||||||   ||||   ACUGUCUU CUCU CACUCGUG GUUUUCGU   CAUA  C CG        U    U        C        -UU    CG |
Stem-loop sequence | UGACAGAAGAGAGUGAGCACACAAAGGCACAUGUAUAAGCGCAUACUUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012608676.1 |
|
1.5 | PREDICTED: Gossypium raimondii nucleolar complex protein 3 homolog (LOC105783301), mRNA | nucleolar complex protein 3 homolog(LOC105783301) | coding protein | psRNATarget |