| ncRNA ID | novel_gra_miR10 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr10:60540776-60540982 [+] |
| Reference genome | Graimondii2_0 |
| Source | SRR616255 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AUUGCCGUUAAUGGUGUAAUGGUA - 24 |
| Stem-loop(if miRNA) |
-- C AC AAAAAAA AAAUUACUAAAAAC AUUG CGUUAAUGGUGUAAUGGUAAGCUGACGUGGCACGUUAAAUCAUCAUUUCAAACAAAA UUUAGGUUAAAUUAUA UU G |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || A UAGC GCAAUUACCACAUUGCCAUUCGACUGCACCGUGCAAUUUAGUAGUAAAGUUUGUUUU AAAUCCAAUUUAAUAU AC A AU A -A ---AUUA UAGGGGUAUAAAAA |
| Stem-loop sequence | AUUGCCGUUAAUGGUGUAAUGGUAAGCUGACGUGGCACGUUAAAUCAUCAUUUCAAACAAAAACUUUAGGUUAAAUUAUAAAAAAAAUUAAAUUACUAAAAACGAAAAAAAUAUGGGGAUCAAUUAUAUAAUUUAACCUAAAAUUUUGUUUGAAAUGAUGAUUUAACGUGCCACGUCAGCUUACCGUUACACCAUUAACGACGAUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012586615.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105767091 (LOC105767091), mRNA | uncharacterized LOC105767091(LOC105767091) | coding protein | psRNATarget | |||||||||
| XM_012597436.1 |
|
2.5 | PREDICTED: Gossypium raimondii protein PHR1-LIKE 1-like (LOC105774867), mRNA | protein PHR1-LIKE 1-like(LOC105774867) | coding protein | psRNATarget |