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BaseInfo

ncRNA ID novel_gma_miR9314
Species Glycine max
Class miRNA
Genome position Chr15:19630706-19630758 [-]
Reference genome Glycine_max_v2.0
Source SRR1451627
Length 24
Mature sequence(if miRNA) 30 - AAUAAUCGUCUUUGAAUGUUGUGU - 53
Stem-loop(if miRNA) --                     UGU
  AAUAAUCGUCUUUGAAUGUUG   A
  |||||||||||||||||||||   U
  UUAUUGGCAGAAACUUACAGU   U
CA                     UUC
Stem-loop sequence AAUAAUCGUCUUUGAAUGUUGUGUAUUCUUUGACAUUCAAAGACGGUUAUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   UGUGUUGUAAGUUUCUGCUAAUAA   1
  |||=||||||||||||||=|||||
targets:1483   ACAUAACAUUCAAAGACGGUUAUU   1506

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UGUGUUGUAAGUUUCUGCUAAUAA   1
  |*=|||||||||||||||=|||||
targets:1538   AAGCAACAUUCAAAGACGGUUAUU   1561

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014765538.1
ncRNA:24   UGUGUUGUAAGUUUCUGCUAAUAA   1
  |=**||=||||||||||||||*||
targets:43   AUCGAAUAUUCAAAGACGAUUUUU   66

2.5 PREDICTED: Glycine max uncharacterized LOC100780138 (LOC100780138), transcript variant X2, mRNA uncharacterized LOC100780138(LOC100780138) coding protein psRNATarget
XM_006594108.2
ncRNA:24   UGUGUUGUAAGUUUCUGCUAAUAA   1
  |=**||=||||||||||||||*||
targets:43   AUCGAAUAUUCAAAGACGAUUUUU   66

2.5 PREDICTED: Glycine max uncharacterized LOC100780138 (LOC100780138), transcript variant X1, mRNA uncharacterized LOC100780138(LOC100780138) coding protein psRNATarget