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BaseInfo

ncRNA ID novel_gma_miR9306
Species Glycine max
Class miRNA
Genome position Chr9:12580833-12580930 [-]
Reference genome Glycine_max_v2.0
Source SRR1451626
Length 24
Mature sequence(if miRNA) 1 - ACCGAUGUUGUUGAUGAAGAAAAC - 24
Stem-loop(if miRNA) --     --AA      A           GG      CA         UUA
  UUUCU    UAACAG CAUCGGUUUUU  UAAGAA  GAUGUUGUU   U
  |||||    |||||| |||||||||||  ||||||  |||||||||
  AAAGA    GUUGUU GUAGCCAAAAA  GUUUUU  CUACAACAA   U
CA     AGUA      -           -G      AA         CCA
Stem-loop sequence UUUCUAAUAACAGACAUCGGUUUUUGGUAAGAACAGAUGUUGUUUUAUUACCAACAACAUCAAUUUUUGGAAAAACCGAUGUUGUUGAUGAAGAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773958.1
ncRNA:24   CAAAAGAAGUAGUUGUUGUAGCCA   1
  *|*|||*|||||||||||||||*|
targets:1452   CUCUUCGUCAUCAACAACAUCGAU   1475

2.5 PREDICTED: Glycine max squamosa promoter-binding-like protein 8 (LOC100808178), transcript variant X2, mRNA squamosa promoter-binding-like protein 8(LOC100808178) coding protein psRNATarget
XM_014773955.1
ncRNA:24   CAAAAGAAGUAGUUGUUGUAGCCA   1
  *|*|||*|||||||||||||||*|
targets:1455   CUCUUCGUCAUCAACAACAUCGAU   1478

2.5 PREDICTED: Glycine max squamosa promoter-binding-like protein 8 (LOC100808178), transcript variant X1, mRNA squamosa promoter-binding-like protein 8(LOC100808178) coding protein psRNATarget