ncRNA ID | novel_gma_miR9306 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:12580833-12580930 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACCGAUGUUGUUGAUGAAGAAAAC - 24 |
Stem-loop(if miRNA) |
--     --AA      A           GG      CA         UUA   UUUCU    UAACAG CAUCGGUUUUU  UAAGAA  GAUGUUGUU   U   |||||    |||||| |||||||||||  ||||||  |||||||||   AAAGA    GUUGUU GUAGCCAAAAA  GUUUUU  CUACAACAA   U CA     AGUA      -           -G      AA         CCA |
Stem-loop sequence | UUUCUAAUAACAGACAUCGGUUUUUGGUAAGAACAGAUGUUGUUUUAUUACCAACAACAUCAAUUUUUGGAAAAACCGAUGUUGUUGAUGAAGAAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773958.1 |
|
2.5 | PREDICTED: Glycine max squamosa promoter-binding-like protein 8 (LOC100808178), transcript variant X2, mRNA | squamosa promoter-binding-like protein 8(LOC100808178) | coding protein | psRNATarget | |||||||||
XM_014773955.1 |
|
2.5 | PREDICTED: Glycine max squamosa promoter-binding-like protein 8 (LOC100808178), transcript variant X1, mRNA | squamosa promoter-binding-like protein 8(LOC100808178) | coding protein | psRNATarget |