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BaseInfo

ncRNA ID novel_gma_miR9301
Species Glycine max
Class miRNA
Genome position Chr6:17955155-17955230 [+]
Reference genome Glycine_max_v2.0
Source SRR1451626
Length 23
Mature sequence(if miRNA) 1 - UUGACAUCGGUUUUUUAGAAAAC - 23
Stem-loop(if miRNA) --                  -        U     ACU
  UUGACAUCGGUUUUUUAG AAAACCGA GUUAA   A
  |||||||||||||||||| |||||||| |||||   A
  AACUGUAGCCAAAAGGUC UUUUGGCU CAAUU   C
AC                  A        U     AUA
Stem-loop sequence UUGACAUCGGUUUUUUAGAAAACCGAUGUUAAACUAACAUAUUAACUUCGGUUUUACUGGAAAACCGAUGUCAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001255117.2
ncRNA:23   CAAAAGAU-UUUUUGGCUACAGUU   1
  ****|||=-|||||||||||||||
targets:266   UGGAUCUGCAAAAACCGAUGUCAA   289

3.0 Glycine max serine/threonine-protein kinase PBS1-like (LOC100790828), mRNA serine/threonine-protein kinase PBS1-like(LOC100790828) coding protein psRNATarget
BT093988.1
ncRNA:23   CAAAAGAU-UUUUUGGCUACAGUU   1
  ****|||=-|||||||||||||||
targets:268   UGGAUCUGCAAAAACCGAUGUCAA   291

3.0 Soybean clone JCVI-FLGm-18C7 unknown mRNA NA coding protein psRNATarget