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BaseInfo

ncRNA ID novel_gma_miR9300
Species Glycine max
Class miRNA
Genome position Chr6:1798490-1798543 [+]
Reference genome Glycine_max_v2.0
Source SRR1451626
Length 19
Mature sequence(if miRNA) 1 - UAAUCUGUAUGAGUUAUAC - 19
Stem-loop(if miRNA) --               A    AAUUA
  UAAUCUGUAUGAGUU UACG     A
  ||||||||||||||| ||||
  AUUAGGCAUACUCAA AUGU     C
UG               A    CAACU
Stem-loop sequence UAAUCUGUAUGAGUUAUACGAAUUAACUCAACUGUAAAACUCAUACGGAUUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK246094.1
ncRNA:19   CAUAUUGAGUAUGUCUAAU   1
  ||||||||||||||*|||=
targets:1834   GUAUAACUCAUACAUAUUG   1852

2.5 Glycine max cDNA, clone: GMFL01-51-H21 NA coding protein psRNATarget
XM_003538389.3
ncRNA:19   CAUAUUGAGUAUGUCUAAU   1
  ||||||||||||||*|||=
targets:1898   GUAUAACUCAUACAUAUUG   1916

2.5 PREDICTED: Glycine max UDP-glycosyltransferase 76F1-like (LOC100783133), mRNA UDP-glycosyltransferase 76F1-like(LOC100783133) coding protein psRNATarget