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BaseInfo

ncRNA ID novel_gma_miR9288
Species Glycine max
Class miRNA
Genome position Chr17:13895409-13895520 [-]
Reference genome Glycine_max_v2.0
Source SRR1451626
Length 24
Mature sequence(if miRNA) 89 - UUACCAGAGGCUGUAAUCGAAUAC - 112
Stem-loop(if miRNA) --    -      CU        A   ------------------C      CAAAAUUGAUUUU
  UUAC CAGAGG  GUAAUCGA UAC                   AGAAUC             A
  |||| ||||||  |||||||| |||                   ||||||             C
  AAUG GUUUCC  CAUUAGCU AUG                   GUUUGA             A
CU    U      AU        A   UUGAAAAUUUUAAAUUUAA      AAGACUUUGUCGA
Stem-loop sequence UUACCAGAGGCUGUAAUCGAAUACCAGAAUCCAAAAUUGAUUUUACAAGCUGUUUCAGAAAGUUUGAAUUUAAAUUUUAAAAGUUGUAAUCGAUUACUACCUUUGUGUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001254083.2
ncRNA:24   CAU----AAGCUAAUGUCGGAGACCAUU   1
  |||----|||||||*|||||||||||*|
targets:486   GUAGGAUUUCGAUUUCAGCCUCUGGUUA   513

2.5 Glycine max RNA polymerase II transcriptional coactivator KIWI-like (LOC100820368), mRNA RNA polymerase II transcriptional coactivator KIWI-like(LOC100820368) coding protein psRNATarget