ncRNA ID | novel_gma_miR9288 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:13895409-13895520 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 89 - UUACCAGAGGCUGUAAUCGAAUAC - 112 |
Stem-loop(if miRNA) |
--    -      CU        A   ------------------C      CAAAAUUGAUUUU   UUAC CAGAGG  GUAAUCGA UAC                   AGAAUC             A   |||| ||||||  |||||||| |||                   ||||||             C   AAUG GUUUCC  CAUUAGCU AUG                   GUUUGA             A CU    U      AU        A   UUGAAAAUUUUAAAUUUAA      AAGACUUUGUCGA |
Stem-loop sequence | UUACCAGAGGCUGUAAUCGAAUACCAGAAUCCAAAAUUGAUUUUACAAGCUGUUUCAGAAAGUUUGAAUUUAAAUUUUAAAAGUUGUAAUCGAUUACUACCUUUGUGUAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001254083.2 |
|
2.5 | Glycine max RNA polymerase II transcriptional coactivator KIWI-like (LOC100820368), mRNA | RNA polymerase II transcriptional coactivator KIWI-like(LOC100820368) | coding protein | psRNATarget |