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BaseInfo

ncRNA ID novel_gma_miR9285
Species Glycine max
Class miRNA
Genome position Chr17:9534024-9534089 [+]
Reference genome Glycine_max_v2.0
Source SRR1451626
Length 21
Mature sequence(if miRNA) 46 - UUGGAGGUAUAUUUGAAUUGU - 66
Stem-loop(if miRNA) --        C C   -    UACAAA     AA
  GAUUCAAG A ACC CCAG      UAUUU  U
  |||||||| | ||| ||||      |||||  G
  UUAAGUUU U UGG GGUU      AUAGA  C
UG        A A   A    --UCCC     GU
Stem-loop sequence GAUUCAAGCACACCCCAGUACAAAUAUUUAAUGCUGAGAUACCCUUUGGAGGUAUAUUUGAAUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006591186.2
ncRNA:21   UGUUAAGUUUAUAUGGAGGUU   1
  |||=|||||||||||||||||
targets:2162   ACAGUUCAAAUAUACCUCCAA   2182

1.0 PREDICTED: Glycine max uncharacterized protein At5g39865-like (LOC100805215), transcript variant X3, mRNA uncharacterized protein At5g39865-like(LOC100805215) coding protein psRNATarget