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BaseInfo

ncRNA ID	novel_gma_miR9283
Species	Glycine max
Class	miRNA
Genome position	Chr10:49903096-49903164 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451626
Length	19
Mature sequence(if miRNA)	51 - AGAAACAUGAUUGCCGUUG - 69
Stem-loop(if miRNA)	--   U      -UU    GCA      CUAGAACG   ACG GCAAUU   UUUC   UUUAUU        A   ||| ||||||   ||||   ||||||        U   UGC CGUUAG   AAAG   AAAUAA        U GU   -      UAC    --A      AAAUAAAA
Stem-loop sequence	ACGUGCAAUUUUUUUCGCAUUUAUUCUAGAACGAUUAAAAUAAAAAUAAAAGAAACAUGAUUGCCGUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014771947.1	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |||=|||||||*||||||| targets:1729   CAAUGGCAAUCUUGUUUCU   1747 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X2, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134)	coding protein	psRNATarget
XM_003553611.3	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |||=|||||||*||||||| targets:2018   CAAUGGCAAUCUUGUUUCU   2036 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X1, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134)	coding protein	psRNATarget
NM_001249323.2	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |*|=||||||||||||||* targets:767   CUAUGGCAAUCAUGUUUCC   785 Target Full Sequence	3.0	Glycine max uncharacterized LOC100305755 (LOC100305755), mRNA	uncharacterized LOC100305755(LOC100305755)	coding protein	psRNATarget
BT089529.1	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |*|=||||||||||||||* targets:769   CUAUGGCAAUCAUGUUUCC   787 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-2O7 unknown mRNA	NA	coding protein	psRNATarget
XM_014778315.1	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |*|=||||||||||||||* targets:872   CUAUGGCAAUCAUGUUUCC   890 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100305755 (LOC100305755), transcript variant X1, mRNA	uncharacterized LOC100305755(LOC100305755)	coding protein	psRNATarget
XM_014775848.1	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |||=|*||||||||||||* targets:2116   CAAUGUCAAUCAUGUUUCA   2134 Target Full Sequence	3.0	PREDICTED: Glycine max glutamine-dependent NAD(+) synthetase-like (LOC100804904), transcript variant X4, mRNA	glutamine-dependent NAD(+) synthetase-like(LOC100804904)	coding protein	psRNATarget
XM_014775847.1	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |||=|*||||||||||||* targets:2265   CAAUGUCAAUCAUGUUUCA   2283 Target Full Sequence	3.0	PREDICTED: Glycine max glutamine-dependent NAD(+) synthetase-like (LOC100804904), transcript variant X2, mRNA	glutamine-dependent NAD(+) synthetase-like(LOC100804904)	coding protein	psRNATarget
XM_006580441.2	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |||=|*||||||||||||* targets:2281   CAAUGUCAAUCAUGUUUCA   2299 Target Full Sequence	3.0	PREDICTED: Glycine max glutamine-dependent NAD(+) synthetase-like (LOC100804904), transcript variant X3, mRNA	glutamine-dependent NAD(+) synthetase-like(LOC100804904)	coding protein	psRNATarget
XM_003525281.3	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |||=|*||||||||||||* targets:2455   CAAUGUCAAUCAUGUUUCA   2473 Target Full Sequence	3.0	PREDICTED: Glycine max glutamine-dependent NAD(+) synthetase-like (LOC100804904), transcript variant X1, mRNA	glutamine-dependent NAD(+) synthetase-like(LOC100804904)	coding protein	psRNATarget
XM_003530407.3	ncRNA:19   GUUGCCGUUAGUACAAAGA   1   |||=|*||||||||||||* targets:2545   CAAUGUCAAUCAUGUUUCA   2563 Target Full Sequence	3.0	PREDICTED: Glycine max glutamine-dependent NAD(+) synthetase-like (LOC100777145), mRNA	glutamine-dependent NAD(+) synthetase-like(LOC100777145)	coding protein	psRNATarget