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BaseInfo

ncRNA ID novel_gma_miR9282
Species Glycine max
Class miRNA
Genome position Chr15:45968354-45968432 [+]
Reference genome Glycine_max_v2.0
Source SRR1451626
Length 24
Mature sequence(if miRNA) 56 - ACAACUUGAGGAUAGUAGGGGAUG - 79
Stem-loop(if miRNA) -- UU       GA   UG   ---G -  -UC     G   
  U  CCUGCUA  UUU  AGU    C CA   AGAUG GUCA
  |  |||||||  |||  |||    | ||   ||||| |||G
  A  GGAUGAU  GGA  UCA    G GU   UCUAU UAGA
GU GG       -A   GU   ACAA U  UAA     A   
Stem-loop sequence UUUCCUGCUAGAUUUUGAGUGCCAUCAGAUGGGUCAGAGAUAUAUCUAAUUGUGAACAACUUGAGGAUAGUAGGGGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003530671.3
ncRNA:24   GUAGGGGAUGAUAGGAGUUCAACA   1
  *|||*|=*|*||||||||||||||
targets:1103   AAUCGCUGAGUAUCCUCAAGUUGU   1126

3.0 PREDICTED: Glycine max uncharacterized LOC100775533 (LOC100775533), mRNA uncharacterized LOC100775533(LOC100775533) coding protein psRNATarget
XM_006602203.2
ncRNA:24   GUAGGGGAUGAUAGGAGUUCAACA   1
  =||=*|=*|*||||||||||||||
targets:1091   UAUUGCUGAAUAUCCUCAAGUUGU   1114

3.0 PREDICTED: Glycine max uncharacterized LOC100786641 (LOC100786641), mRNA uncharacterized LOC100786641(LOC100786641) coding protein psRNATarget