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BaseInfo

ncRNA ID novel_gma_miR9275
Species Glycine max
Class miRNA
Genome position Chr10:2293097-2293184 [+]
Reference genome Glycine_max_v2.0
Source SRR1451626
Length 22
Mature sequence(if miRNA) 67 - UUCCGGAAGCAAUAUGAAAAAU - 88
Stem-loop(if miRNA) --UUC       U            CUAU   --U    -  GAA
     UUAUAUU CUUUCGGAAUGA    UCU   AUUC CG   G
     ||||||| ||||||||||||    |||   |||| ||   C
     AGUAUAA GAAGGCCUUACU    AGA   UAAG GC   A
UAAAA       C            UACU   CUC    A  AUA
Stem-loop sequence UUCUUAUAUUUCUUUCGGAAUGACUAUUCUUAUUCCGGAAGCAAUACGAGAAUCUCAGAUCAUUCAUUCCGGAAGCAAUAUGAAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581203.2
ncRNA:22   UAAAAAGUAUAACGAAGGCCUU   1
  *|||*|*||||||||||||||=
targets:1379   CUUUGUGAUAUUGCUUCCGGAG   1400

3.0 PREDICTED: Glycine max DNA excision repair protein ERCC-8-like (LOC100790433), mRNA DNA excision repair protein ERCC-8-like(LOC100790433) coding protein psRNATarget